Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941455.1_cds_XP_016485281.1_76222
CDS Infomation

[gene=LOC107805727] [db_xref=GeneID:107805727] [protein=V-type proton ATPase subunit H-like] [protein_id=XP_016485281.1] [location=complement(join(6992..7240,9720..9899,10112..10237,10931..11056,11329..11490,12067..12184,12297..12362,13259..13331,13400..13502,13872..13997,14414..14449))] [gbkey=CDS]
Sequence

ATGACAATTGAGAATGCTGAGCTCACGACGGAGCAGGTTTTGAGAAGGGATATTCTATGG
GACACTTACATGACCACGAAGCTGATCACCGAAACTGGTCTTCAGCTGTTGAGGCGTTAT
GATAAAAAGGCTGAAAGTGACAAAGCTCAGTTGCTGGATGATGATGGTCCAGCTTATGTC
AGTGTGTTTGTTACCATTTTACGAGATATCTTCAAGGAAGAAACTGTGGAATATGTTTTA
GCTTTGATTGATGAAATGCTTACAGCAAACCCAAGAAGAGCGAAATTATTCCATGACAAC
TCTTTTGCCAATGAAGACACTTATGAACCTTTCCTTAGATTGCTTTGGAAAGGTAATTGG
TTCATACAAGAGAAGAGCTGTAAGATTCTCTCTGTGATAGTGAGTGCTAGGCCAAAAGTT
CAGAATGGTGTTGATGCAAACGGAGATGCTGCCAGTTCAAAGAGGAAACTCACCACCGCT
GAAGATGTTCTGAGAGGCCTGGTTGAGTGGCTATGCGCGCAGCTGAGAAAGCCTTCTCAT
CCTAGCTGTAGCATTCCCGCTGCCATCAATTGCCTTGCAACTCTGTTGAAGGAACCTATT
GTTCGATCTTCATTTGTTCAAGCTGACGGAGTGAAGCTGCTTGTTCCTTTAATTACACCA
GCATCTACTCAGCAGTCCATTCAGCTTCTCTACGAGACATGCCTATGCGTCTGGCTTTTG
TCTTACTATGAACCTGCAATTGAGTACTTGGCTACTTCTAGGGCCCTACCTCGATTGACA
GAAGTTGTTAAAGGTTCGACAAAGGAGAAGGTCGTCAGGGTTGTTATCTTGACTCTTAGG
AATTTGCTTTCCAAAGGGACATTTGGTGCTCAGATGGTAGACGTGGGAGTGCTGCAAATT
GTACAGAACCTGAAAGCGCAGGCTTGGAGTGATGAGGACCTTTTGGATGCTCTGAATCAA
CTTGAAGAAGGATTGAAGGACAACATTAAAAAATTGAGTTCATACGACAAGTACAAGCAG
GAAGTCCTACTTGGCAATCTTGATTGGTCTCCTATGCATAAAGATCCTCTATTCTGGAAG
GAGAATATAAATAATTTCGAGGAGAATGGATTCCAGATCTTGAGAGTGCTTATGACAATC
TTGGACACATCAAGTGATGCAAGGACACTCGCTGTCGCTTGCTACGATTTGTCTCAGTTC
ATTCAATGCCATCCTGCCGGGCGAATCATAGTGGCCGACCTCAAAGCTAAGGAACGCGTA
ATGAAACTATTGAACCATGAAACTGCAGAGGTCACGAAAAATGCATTGCTTTGCATCCAG
AGGCTTTTCTTAGGTGCCAAATATGCCAGCTTTTTGCAGGCTTAA

Peptide Sequence

PEP ID

XP_016485281.1
PEP Infomation

PREDICTED: V-type proton ATPase subunit H-like [Nicotiana tabacum]
Sequence

MTIENAELTTEQVLRRDILWDTYMTTKLITETGLQLLRRYDKKAESDKAQLLDDDGPAYV
SVFVTILRDIFKEETVEYVLALIDEMLTANPRRAKLFHDNSFANEDTYEPFLRLLWKGNW
FIQEKSCKILSVIVSARPKVQNGVDANGDAASSKRKLTTAEDVLRGLVEWLCAQLRKPSH
PSCSIPAAINCLATLLKEPIVRSSFVQADGVKLLVPLITPASTQQSIQLLYETCLCVWLL
SYYEPAIEYLATSRALPRLTEVVKGSTKEKVVRVVILTLRNLLSKGTFGAQMVDVGVLQI
VQNLKAQAWSDEDLLDALNQLEEGLKDNIKKLSSYDKYKQEVLLGNLDWSPMHKDPLFWK
ENINNFEENGFQILRVLMTILDTSSDARTLAVACYDLSQFIQCHPAGRIIVADLKAKERV
MKLLNHETAEVTKNALLCIQRLFLGAKYASFLQA

Transcript Sequence

Gene sequence data has not been registered.